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姓　　名： 姚小洪
职　　称： 研究员
职 务： 博士生导师，PI
电 话/传 真： 027-87700884/027-87700877
电子邮件： yaox@wbgcas.cn
所属课题组： 猕猴桃群体基因组学学科组

简要履历：

1996.09-2000.07 江西农业大学 园艺系 园艺学学士学位
2000.09-2003.07 江西农业大学 园艺系 果树学硕士学位
2003.09-2006.06 中科院武汉植物研究所 植物学 博士学位
2006.07-2009.08 中国科学院武汉植物园 植物保育遗传学学科组 助理研究员
2009.09-2016.08 中国科学院武汉植物园 植物保育遗传学学科组 副研究员
2010.11-2011.11 美国密西根大学 生态与进化系 访问学者
2016.09-2021.08 中国科学院武汉植物园 猕猴桃资源与育种学科组 研究员
2021.09- 中国科学院武汉植物园 猕猴桃群体基因组学科组 PI

研究领域：

猕猴桃种质资源收集与性状评价
猕猴桃野生居群的居群遗传学以及进化
猕猴桃重要农艺性状形成的遗传解析与新种质创制
猕猴桃新品种选育

社会任职：

中国园艺学会猕猴桃分会理事
Annals of Botany, Genetica, Scientific Reports,Tree Genetics and Genomes, Molecular Breeding, Plant Ecology, Scientia Horticulturae, Biochemical Systematics and Ecology,生物多样性，园艺学报，生态学报和植物科学学报审稿专家。

获奖及荣誉：

 

代表论著：

*corresponding author
  1. Zhang X#, Guo R#, Shen R, Landis JB, Jiang Q, Liu F, Wang H*, Yao X*. 2023. The genomic and epigenetic footprint of local adaptation to variable climates in kiwifruit. Horticulture Research, 10: uhad031. (# equal contribution).
  2. Jiang Q, Xu Q, Pan J, Yao X*, Cheng Z*. 2022. Impacts of chronic habitat fragmentation on genetic diversity of natural populations of Prunus persica in China. Plants, 11: 1154.
  3. Jiang Q, Wang Z, Hu G, Yao X*. 2022. Genome-wide identifcation and characterization of AP2/ERF gene superfamily during flower development in Actinidia eriantha. BMC Genomics, 23: 650.
  4. Yao X#, Wang S#, Wang Z#, Li D, Jiang Q, Zhang Q, Gao L, Zhong C, Huang H, Liu Y*. 2022. The genome sequencing and comparative analysis of a wild kiwifruit Actinidia eriantha. Molecular Horticulture, 2: 13. (# equal contribution).
  5. Wang Z, Hu G, Li Z, Zhong C*, Yao X*. 2022. Characterizing tetraploid populations of Actinidia chinensis for kiwifruit genetic improvement. Plants, 11: 1154.
  6. Guo R, Zhang Y, Zhang H, Landis JB, Zhang X, Wang H, Yao X*. 2022. Molecular phylogeography and species distribution modelling evidence of ‘oceanic’ adaptation for Actinidia eriantha with a refugium along the oceanic–continental gradient in a biodiversity hotspot. BMC Plant Biology, 22: 89.
  7. Wang Z, Zhong C, Li D, Yan CL, Yao X*, Li Z*. 2021. Cytotype distribution and chloroplast phylogeography of the Actinidia chinensis complex. BMC Plant Biology, 21: 325.
  8. Qiu D, Ping Tang P, Yao X*. 2021. Characterization of the complete chloroplast genome sequence of Actinidia kolomikta. Mitochondrial DNA Part B, 3: 1129-1130.
  9. Zou S, Yao X, Zhong C, Gao P, Wang Z, Huang H*. 2020. Phenotypic characterization of Stauntonia obovatifoliola Hayata subsp. urophylla germplasm: a potential new fruit crop. Genetic Resources & Crop Evolution, 67: 1037-1050.
  10. Wang S#, Li D#, Yao X#, Song Q, Wang Z, Zhang Q, Zhong C, Liu Y*, Huang H*. 2019. Evolution and diversification of kiwifruit mitogenomes through extensive whole-genome rearrangement and mosaic loss of intergenic sequences in a highly variable region. Genome Biology and Evolution, 14: 1192-1206. (# equal contribution).
  11. Li L, Xu Q, Yao X*. 2019. Microsatellite analysis reveals the resilience of genetic diversity within extant populations of three Akebia species to chronic forest fragmentation in China. Plant Ecology, 220: 69-81.
  12. Tang P, Xu Q, Shen R, Yao X*. 2019. Phylogenetic relationship in Actinidia (Actinidiaceae) based on four noncoding chloroplast DNA sequences. Plant Systematics and Evolution, 305: 787-796.
  13. Tang P, Shen R, He R, Yao X*. 2019. The complete chloroplast genome sequence of Actinidia eriantha. Mitochondrial DNA Part B, 4: 2114-2115.
  14. Zou S, Yao X, Zhong C, Li D, Wang Z, Huang H*. 2019. Recurrent somatic embryogenesis and development of somatic embryos in Akebia trifoliata (Thunb.) Koidz (Lardizabalaceae). Plant Cell, Tissue and Organ Culture, 139: 493-504.
  15. Zou S, Yao X, Zhong C, Zhao T, Huang H*. 2019. Effectiveness of recurrent selection in Akebia trifoliata (Lardizabalaceae) breeding. Scientia Horticulturae, 246: 79-85.
  16. Zou S, Yao X, Zhong C, Zhao T, Huang H*. 2018. Genetic analysis of fruit traits and selection of superior clonal lines in Akebia trifoliate (Lardizabalaceae). Euphytica, 214: 111.
  17. Yan M, Fritsch PW, Moore MJ, Feng T, Meng A, Yang J, Tao Deng T, Zhao C, Yao X, Sun H, Wang H*. 2018. Plastid phylogenomics resolves infrafamilial relationships of the Styracaceae and sheds light on the backbone relationships of the Ericales. Molecular Phylogenetics and Evolution, 121: 198-211.
  18. Liu C, Li D, Zhou J, Zhang Q, Tian H, Yao H*. 2017. Construction of a SNP-based genetic linkage map for kiwifruit using next-generation restriction-site-associated DNA sequencing (RADseq). Molecular Breeding, 37: 139.
  19. Guo R, Landis JB, Moore MJ, Meng A, Jian S, Yao X*, Wang H*. 2017. Development and application of transcriptome-derived microsatellites in Actinidia eriantha (Actinidiaceae). Frontiers in Plant Science, 8: 1383.
  20. Tang P, Zhang Q, Xiaohong Yao H*. 2017. Comparative transcript profiling explores differentially expressed genes associated with sexual phenotype in kiwifruit. PLos One 12: e0180542.
  21. Liu Y, Li D, Zhang Q, Song C, Zhong C, Zhang X, Wang Y, Yao X, Wang Z, Zeng S, Wang Y, Guo Y, Wang S, Li X, Li L, Liu C, McCann HC, He W, Niu Y, Chen M, Du L, Gong J, Datson PM, Hilario E, Huang H*. 2017. Rapid radiations of both kiwifruit hybrid lineages and their parents shed light on a two-layer mode of species diversification. New Phytologist, 215: 877-890.
  22. Yan M, Moore MJ, Meng A, Yao X, Wang H*. 2017. The first complete plastome sequence of the basal asterid family Styracaceae (Ericales) reveals a large inversion. Plant Systematics and Evolution, 303: 61-70.
  23. Fritsch PW*, Yao X, Simison B, Cruz BC, Chen T. 2016. Perkinsiodendron, a new genus in the Styracaceae based on morphology and DNA sequences. Journal of the Botanical Research Institute of Texas, 10: 109-117.
  24. Yang A, Dick CW, Yao X*, Huang H. 2016. Impacts of biogeographic history and marginal population genetics on species range limits: a case study of Liriodendron chinense. Scientific Reports, 6: 25632.
  25. Yang A, Wei N, Fritsch PW, Yao X*. 2016. AFLP genome scanning reveals divergent selection in natural populations of Liriodendron chinense (Magnoliaceae) along a latitudinal transect. Frontiers in Plant Science, 7: 698.
  26. Liu C, Zhang Q, Yao X, Zhong C, Yan C, Huang H*. 2016. Characterization of genome-wide simple sequence repeats and application in interspecific genetic map integration in kiwifruit. Tree Genetics & Genomes, 12: 1-9.
  27. Yi G, Zhao T, Yin Z, Tang P, Qiu Y, Yao X*. 2016. Mining and characterizing EST-SSR markers from ESTs of Torreya grandis. Biochemical Systematics and Ecology, 64: 124-128.
  28. Zhang J, Li Z, Pritsch PW, Tian H, Yang A, Yao X*. 2015. Phylogeography and genetic structure of a Tertiary relict tree species, Tapiscia sinensis (Tapisciaceae): implications for conservation. Annals of Botany, 116: 727-737.
  29. Yao X, Liu L, Yan M, Li D, Zhong C, Huang H*. 2015. Exon primed intron-crossing (EPIC) markers reveals natural hybridization and introgression in Actinidia (Actinidiaceae) with sympatric distribution. Biochemical Systematics and Ecology, 59: 246-255.
  30. Yao X, Tang P, Li Z, Li D, Liu Y, Huang H*. 2015. The first complete chloroplast genome sequences in Actinidiaceae: genome structure and comparative analysis. PLos ONE, 10: e0129347.
  31. Ye Q, Tang F, Wei N, Yao X*. 2014. Molecular and quantitative trait variation within and among small fragmented populations of the endangered plant species Psilopeganum sinense. Annals of Botany, 113:79-86.
  32. Tang F, Ye Q, Yao X*. 2014. Patterns of genetic variation in the Chinese endemic Psilopeganum sinense (Rutaceae) as revealed by nuclear microsatellites and chloroplast microsatellites. Biochemical Systematics and Ecology, 55: 190-197.
  33. Zhang P, Wang Z, Liu Y, Tian H, Yao X, Zhang J*. 2013. Isolation and characterization of 11 polymorphic microsatellite markers in Tapiseia sinensis (Staphyleaceae). Applications in Plant Science, 1 (12): 1300051.
  34. Zhang J, Xing C, Tian H, Yao X*. 2013. Microsatellite genetic variation in the Chinese endemic Eucommia ulmoides (Eucommiaceae): implications for conservation. Botanical Journal of the Linnean Society, 173:775-785.
  35. Yao X, Li C, Dick CW*. 2013. Exon Primed, Intron Crossing (EPIC) markers for evolutionary studies of Ficus and other Moraceae. Applications in Plant Science, 1: 1300037.
  36. Yao X, Deng J, Hongwen Huang H*. 2012. Genetic diversity in Eucommia ulmoides (Eucommiaceae), an endangered traditional Chinese medicinal plant. Conservation Genetics, 13:1499-1507.
  37. Tian H, Kang M, Liu Y, Ye Q, Yao X*. 2012. High genetic diversity in remnant natural populations of Myricaria laxiflora, a species once considered to be extinct in the wild. Aquatic Botany, 103: 48-53.
  38. Zhang J, Ye, Gao P, Yao X*. 2012. Genetic footprints of habitat fragmentation in the extant populations of Sinojackia (Styracaceae): implications for conservation. Botanical Journal of the Linnean Society, 170: 232-242.
  39. Yang A, Zhang J, Tian H, Yao X*. 2012. Characterization of 39 novel EST-SSR markers for Liriodendron tulipifera and cross-species amplification in L.chinense (Magnoliaceae). American Journal of Botany, e460-e464.
  40. Yao X, Zhang J, Ye Q, Huang H*. 2011. Fine-scale spatial genetic structure and gene flow in a small, fragmented population of Sinojackia rehderiana (Styracaceae), an endangered tree species endemic to China. Plant Biology, 13: 401-410.
  41. Yang A, Zhang J, Yao X, Huang H*. 2011. Chloroplast microsatellites primers for Liriodendron tulipifera (Magnoliaceae) and cross-species amplification in L. chinense. American Journal of Botany, e123-126.
  42. Li L, Yao X, Zhong C, Chen X, Huang H*. 2010. Akebia: a potential new fruit crop in China. Hortscience, 45: 4-10 (cover story).
  43. Zhang J, Ye Q, Yao X*, Huang H*. 2010. Spontaneous interspecific hybridization and patterns of pollen dispersal in ex situ populations of tree species (Sinojackia xylocarpa) that is extinct in the wild species. Conservation Biology, 24: 246-255.
  44. Zhang J, Ye Q, Yao X*, Huang H. 2010. Microsatellite diversity and mating system of Sinojackia xylocarpa (Styracaceae), a species extinct in the wild. Biochemical Systematics and Ecology, 38: 154-159.
  45. Gao P, Yang A, Yao X*, Huang H. 2009. Isolation and characterization of nine polymorphic microsatellite loci in the endangered shrub Disanthus cercidifolius var. longipes (Hamamelidaceae). Molecular Ecology Resources, 9: 1047-1049.
  46. Li L, Yao X, Chen X, Huang H*. 2009. Development and characterization of microsatellite loci in Chinese medicinal plant Akebia trifoliate ssp. australis and cross-species amplification in closely related taxa. Conservation Genetics, 10: 959-962.
  47. Yao X, Ye Q, Fritsch PW, Cruz BC, Huang H*. 2008. Phylogeny of Sinojackia (Styracaceae) based on DNA sequence and microsatellite data: implications for taxonomy and conservation. Annals of Botany, 101: 651-659.
  48. Yao X, Zhang J, Ye Q, Huang H*. 2008. Characterization of 14 novel microsatellite loci in the endangered Liriodendron chinense (Magnoliaceae) and cross-species amplification in closely related taxa. Conservation Genetics, 9: 483-485.
  49. Zhang J, Yao X, Wei X, Chen L, Jiang M*. 2008. Development and characterization of 14 polymorphic microsatellite loci in the endangered tree Euptelea pleiospermum (Eupteleaceae). Molecular Ecology Resources, 8: 314-316.
  50. Tang F, Ye Q, Yao X, Huang H*. 2008. Isolation and characterization of microsatellite loci in Psilopeganum sinense Hemsl (Rutaceae), an endangered herb endemic to Yangtze River valley. Molecular Ecology Resources, 8: 227–229.
  51. Yao X, Ye Q, Kang M, Huang H*. 2007. Microsatellites analysis reveals interpopulation differention and gene flow in endangered tree Changiostyrax dolichocarpa (Styracaceae) with fragmented distribution in central China. New Phytologist, 176: 472-480.
  52. Yao X, Ye Q, Ge J, Kang M, Huang H*. 2007. A new species of Sinojackia (Styracaceae) from Hubei, central China. Novon, 17: 138-140.
  53. Yao X, Gao L, Yang B*. 2007. Genetic diversity of wild Cymbidium goeringii (Orchidaceae) populations from Hubei based on ISSR analysis. Frontiers of Biology in China, 2: 419-424.
  54. Yao X, Ye Q, Kang M, Zhou J, Xu Y, Wang Y, Huang H*. 2006. Characterization of microsatellite markers in the endangered Sinojackia xylocarpa (Styracaceae) and cross-species amplification in closely related taxa. Molecular Ecology Notes, 6: 133-136.
  55. Ye Q#, Yao X#, Zhang S, Kang M, Huang H*. 2006. Potential risks of hybridization in ex situ collections of two endangered species of Sinojackia Hu (Styracaceae). Journal of Integrative Plant Biology, 48: 867-872 (#co-first authors).
  56. Kang M, Pan L, Yao X, Huang H. 2006. Development and characterization of polymorphic microsatellite loci in endangered fern Adiantum reniforme var. sinense. Conservation genetics, 7: 807-810.
  57. Chen L, Les DH, Xu L, Yao X, Kang M, Huang H*. 2006. Isolation and characterization of a set of microsatellite loci in the submerged macrophyte, Vallisneria spinulosa Yan (Hydrocharitaceae). Molecular Ecology Notes, 6: 1243-1245.
  58. Xu X*, Yao X, Chen H. 2003. Applications of Modern Biotechnology on Kiwifruit. Acta Hort, 610: 525-531.

中文期刊论文
  1. 江全，邱东萍，汪志，李作洲，姚小洪*. 2021. 植物局部适应性的研究进展. 植物科学学报, 39: 559-570.
  2. 闫明科，徐强，刘春燕，张琼，姚小洪*. 2015. 基于microRNA深度测序的猕猴桃性别分化初探. 园艺学报, 42: 1260-1272.
  3. 杨爱红,张金菊, 田 华, 姚小洪*，黄宏文. 2014. 鹅掌楸贵州烂木山居群的微卫星遗传多样性及空间遗传结构. 生物多样性, 22: 375-384.
  4. 刘磊，姚小洪，黄宏文*.2013.猕猴桃EPIC 标记开发及其在猕猴桃属植物系统发育分析中的应用. 园艺学报, 40: 1162-1168.
  5. 阮咏梅，张金菊，姚小洪，叶其刚*. 2012. 黄梅秤锤树孤立居群的遗传多样性与小尺度空间遗传结构. 生物多样性, 20: 460-469.
  6. 杜玮炜，姚小洪，黄宏文*.2009.环境胁迫对雷公藤中雷公藤红素含量的影响. 植物生态学报, 33:180-185.
  7. 田华，康明，李丽，姚小洪，黄宏文*.2009.中国板栗自然居群微卫星(SSR)遗传多样性. 生物多样性, 17: 296-302.
  8. 张金菊，叶其刚，姚小洪，张胜菊，黄宏文*.2008.片断化生境中濒危植物黄梅秤锤树的开花生物学、繁育系统与生殖成功的初步研究. 植物生态学报, 32: 743-750.
  9. 姚小洪,叶其刚，康明，黄宏文*. 2005.秤锤树属与长果安息香属植物的地理分布及其濒危现状. 生物多样性, 13: 339-346.
  10. 姚小洪，徐小彪，高浦新，李作洲，黄宏文*.2005.江西猕猴桃属(Actinidia)植物的分布及其区系特征. 武汉植物学研究, 23: 256-261.

专著
  1. 黄宏文，钟彩虹，姜正旺，李新伟，姚小洪，李大卫等编著.2013.猕猴桃属：分类、资源、驯化、栽培. 北京：科学出版社.
  2. Xiaohong Yao, Hongwen Huang. 2016. Cytoplasmic DNA in Actinidia. In: Raffaele Testolin, Hongwen Huang, A. Ross Ferguson (editors). The Kiwifruit Genome. Springer, Switzerland.

承担科研项目情况：

国家自然科学基金面上项目：中国特有经济植物毛花猕猴桃局部适应性的遗传基础，2021-2024.
国家重点研究计划子课题：多年生园艺作物无性系变异和繁殖的基础与调控，果实发育与成熟期调控，2018-2022.
国家自然科学基金面上项目：中国特有经济植物毛花猕猴桃对生境片断化的遗传响应与适应机制，2018-2021.
中国科学院骨干人才计划项目：基于高密度SNP遗传图谱的猕猴桃糖酸含量的QTL定位，2016-2018.
地方政府委托项目: 浙江泰顺县猕猴桃科技服务，2016-2021.
中国科学院STS项目：新型水果三叶木通种质创新，2017-2018.
江西省重点研发计划项目：猕猴桃优异雄株资源收集及种质资源圃建设，2016-2019.
国家自然科学基金面上项目：孑遗植物鹅掌楸分布范围限制的进化机制，2013-2016.
中国科学院优秀青年科技专项：物种分布范围限制的遗传学分析：濒危植物鹅掌楸的遗传多样性、基因流以及适应性遗传分化，2010-2013.
中国科学院重要方向性项目子课题：川东鄂西植物多样性的维持机制，2012-2015.
中国科学院重要方向性项目：植物园迁地保护濒危植物秤锤树的遗传学风险评估与回归引种居群的科学构建，2009-2011.
中国科学院重要方向性项目子课题：中国特有经济植物野生居群基因流动态及有益基因发掘，2007-2010.